@comment $OpenBSD: PLIST,v 1.5 2015/04/03 09:46:53 jasper Exp $
bin/bp_aacomp.pl
bin/bp_biofetch_genbank_proxy.pl
bin/bp_bioflat_index.pl
bin/bp_biogetseq.pl
bin/bp_blast2tree.pl
bin/bp_bulk_load_gff.pl
bin/bp_chaos_plot.pl
bin/bp_classify_hits_kingdom.pl
bin/bp_composite_LD.pl
bin/bp_das_server.pl
bin/bp_dbsplit.pl
bin/bp_download_query_genbank.pl
bin/bp_extract_feature_seq.pl
bin/bp_fast_load_gff.pl
bin/bp_fastam9_to_table.pl
bin/bp_fetch.pl
bin/bp_filter_search.pl
bin/bp_flanks.pl
bin/bp_gccalc.pl
bin/bp_genbank2gff.pl
bin/bp_genbank2gff3.pl
bin/bp_generate_histogram.pl
bin/bp_heterogeneity_test.pl
bin/bp_hivq.pl
bin/bp_hmmer_to_table.pl
bin/bp_index.pl
bin/bp_load_gff.pl
bin/bp_local_taxonomydb_query.pl
bin/bp_make_mrna_protein.pl
bin/bp_mask_by_search.pl
bin/bp_meta_gff.pl
bin/bp_mrtrans.pl
bin/bp_mutate.pl
bin/bp_netinstall.pl
bin/bp_nexus2nh.pl
bin/bp_nrdb.pl
bin/bp_oligo_count.pl
bin/bp_pairwise_kaks.pl
bin/bp_parse_hmmsearch.pl
bin/bp_process_gadfly.pl
bin/bp_process_sgd.pl
bin/bp_process_wormbase.pl
bin/bp_query_entrez_taxa.pl
bin/bp_remote_blast.pl
bin/bp_revtrans-motif.pl
bin/bp_search2BSML.pl
bin/bp_search2alnblocks.pl
bin/bp_search2gff.pl
bin/bp_search2table.pl
bin/bp_search2tribe.pl
bin/bp_seq_length.pl
bin/bp_seqconvert.pl
bin/bp_seqcut.pl
bin/bp_seqfeature_delete.pl
bin/bp_seqfeature_gff3.pl
bin/bp_seqfeature_load.pl
bin/bp_seqpart.pl
bin/bp_seqret.pl
bin/bp_seqretsplit.pl
bin/bp_split_seq.pl
bin/bp_sreformat.pl
bin/bp_taxid4species.pl
bin/bp_taxonomy2tree.pl
bin/bp_translate_seq.pl
bin/bp_tree2pag.pl
bin/bp_unflatten_seq.pl
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@man man/man3p/Bio::Map::EntityI.3p
@man man/man3p/Bio::Map::FPCMarker.3p
@man man/man3p/Bio::Map::Gene.3p
@man man/man3p/Bio::Map::GeneMap.3p
@man man/man3p/Bio::Map::GenePosition.3p
@man man/man3p/Bio::Map::GeneRelative.3p
@man man/man3p/Bio::Map::LinkageMap.3p
@man man/man3p/Bio::Map::LinkagePosition.3p
@man man/man3p/Bio::Map::MapI.3p
@man man/man3p/Bio::Map::Mappable.3p
@man man/man3p/Bio::Map::MappableI.3p
@man man/man3p/Bio::Map::Marker.3p
@man man/man3p/Bio::Map::MarkerI.3p
@man man/man3p/Bio::Map::Microsatellite.3p
@man man/man3p/Bio::Map::OrderedPosition.3p
@man man/man3p/Bio::Map::OrderedPositionWithDistance.3p
@man man/man3p/Bio::Map::Physical.3p
@man man/man3p/Bio::Map::Position.3p
@man man/man3p/Bio::Map::PositionHandler.3p
@man man/man3p/Bio::Map::PositionHandlerI.3p
@man man/man3p/Bio::Map::PositionI.3p
@man man/man3p/Bio::Map::PositionWithSequence.3p
@man man/man3p/Bio::Map::Prediction.3p
@man man/man3p/Bio::Map::Relative.3p
@man man/man3p/Bio::Map::RelativeI.3p
@man man/man3p/Bio::Map::SimpleMap.3p
@man man/man3p/Bio::Map::TranscriptionFactor.3p
@man man/man3p/Bio::MapIO.3p
@man man/man3p/Bio::MapIO::fpc.3p
@man man/man3p/Bio::MapIO::mapmaker.3p
@man man/man3p/Bio::Matrix::Generic.3p
@man man/man3p/Bio::Matrix::IO.3p
@man man/man3p/Bio::Matrix::IO::mlagan.3p
@man man/man3p/Bio::Matrix::IO::phylip.3p
@man man/man3p/Bio::Matrix::IO::scoring.3p
@man man/man3p/Bio::Matrix::MatrixI.3p
@man man/man3p/Bio::Matrix::Mlagan.3p
@man man/man3p/Bio::Matrix::PSM::IO.3p
@man man/man3p/Bio::Matrix::PSM::IO::mast.3p
@man man/man3p/Bio::Matrix::PSM::IO::masta.3p
@man man/man3p/Bio::Matrix::PSM::IO::meme.3p
@man man/man3p/Bio::Matrix::PSM::IO::psiblast.3p
@man man/man3p/Bio::Matrix::PSM::IO::transfac.3p
@man man/man3p/Bio::Matrix::PSM::InstanceSite.3p
@man man/man3p/Bio::Matrix::PSM::InstanceSiteI.3p
@man man/man3p/Bio::Matrix::PSM::ProtMatrix.3p
@man man/man3p/Bio::Matrix::PSM::ProtPsm.3p
@man man/man3p/Bio::Matrix::PSM::Psm.3p
@man man/man3p/Bio::Matrix::PSM::PsmHeader.3p
@man man/man3p/Bio::Matrix::PSM::PsmHeaderI.3p
@man man/man3p/Bio::Matrix::PSM::PsmI.3p
@man man/man3p/Bio::Matrix::PSM::SiteMatrix.3p
@man man/man3p/Bio::Matrix::PSM::SiteMatrixI.3p
@man man/man3p/Bio::Matrix::PhylipDist.3p
@man man/man3p/Bio::Matrix::Scoring.3p
@man man/man3p/Bio::MolEvol::CodonModel.3p
@man man/man3p/Bio::Nexml::Factory.3p
@man man/man3p/Bio::NexmlIO.3p
@man man/man3p/Bio::Ontology::DocumentRegistry.3p
@man man/man3p/Bio::Ontology::GOterm.3p
@man man/man3p/Bio::Ontology::InterProTerm.3p
@man man/man3p/Bio::Ontology::OBOEngine.3p
@man man/man3p/Bio::Ontology::OBOterm.3p
@man man/man3p/Bio::Ontology::Ontology.3p
@man man/man3p/Bio::Ontology::OntologyEngineI.3p
@man man/man3p/Bio::Ontology::OntologyI.3p
@man man/man3p/Bio::Ontology::OntologyStore.3p
@man man/man3p/Bio::Ontology::Path.3p
@man man/man3p/Bio::Ontology::PathI.3p
@man man/man3p/Bio::Ontology::Relationship.3p
@man man/man3p/Bio::Ontology::RelationshipFactory.3p
@man man/man3p/Bio::Ontology::RelationshipI.3p
@man man/man3p/Bio::Ontology::RelationshipType.3p
@man man/man3p/Bio::Ontology::SimpleGOEngine::GraphAdaptor.3p
@man man/man3p/Bio::Ontology::SimpleOntologyEngine.3p
@man man/man3p/Bio::Ontology::Term.3p
@man man/man3p/Bio::Ontology::TermFactory.3p
@man man/man3p/Bio::Ontology::TermI.3p
@man man/man3p/Bio::OntologyIO.3p
@man man/man3p/Bio::OntologyIO::Handlers::BaseSAXHandler.3p
@man man/man3p/Bio::OntologyIO::Handlers::InterProHandler.3p
@man man/man3p/Bio::OntologyIO::Handlers::InterPro_BioSQL_Handler.3p
@man man/man3p/Bio::OntologyIO::InterProParser.3p
@man man/man3p/Bio::OntologyIO::dagflat.3p
@man man/man3p/Bio::OntologyIO::goflat.3p
@man man/man3p/Bio::OntologyIO::obo.3p
@man man/man3p/Bio::OntologyIO::simplehierarchy.3p
@man man/man3p/Bio::OntologyIO::soflat.3p
@man man/man3p/Bio::ParameterBaseI.3p
@man man/man3p/Bio::Perl.3p
@man man/man3p/Bio::Phenotype::Correlate.3p
@man man/man3p/Bio::Phenotype::MeSH::Term.3p
@man man/man3p/Bio::Phenotype::MeSH::Twig.3p
@man man/man3p/Bio::Phenotype::Measure.3p
@man man/man3p/Bio::Phenotype::OMIM::MiniMIMentry.3p
@man man/man3p/Bio::Phenotype::OMIM::OMIMentry.3p
@man man/man3p/Bio::Phenotype::OMIM::OMIMentryAllelicVariant.3p
@man man/man3p/Bio::Phenotype::OMIM::OMIMparser.3p
@man man/man3p/Bio::Phenotype::Phenotype.3p
@man man/man3p/Bio::Phenotype::PhenotypeI.3p
@man man/man3p/Bio::PhyloNetwork.3p
@man man/man3p/Bio::PhyloNetwork::Factory.3p
@man man/man3p/Bio::PhyloNetwork::FactoryX.3p
@man man/man3p/Bio::PhyloNetwork::GraphViz.3p
@man man/man3p/Bio::PhyloNetwork::RandomFactory.3p
@man man/man3p/Bio::PhyloNetwork::TreeFactory.3p
@man man/man3p/Bio::PhyloNetwork::TreeFactoryMulti.3p
@man man/man3p/Bio::PhyloNetwork::TreeFactoryX.3p
@man man/man3p/Bio::PhyloNetwork::muVector.3p
@man man/man3p/Bio::PopGen::Genotype.3p
@man man/man3p/Bio::PopGen::GenotypeI.3p
@man man/man3p/Bio::PopGen::HtSNP.3p
@man man/man3p/Bio::PopGen::IO.3p
@man man/man3p/Bio::PopGen::IO::csv.3p
@man man/man3p/Bio::PopGen::IO::hapmap.3p
@man man/man3p/Bio::PopGen::IO::phase.3p
@man man/man3p/Bio::PopGen::IO::prettybase.3p
@man man/man3p/Bio::PopGen::Individual.3p
@man man/man3p/Bio::PopGen::IndividualI.3p
@man man/man3p/Bio::PopGen::Marker.3p
@man man/man3p/Bio::PopGen::MarkerI.3p
@man man/man3p/Bio::PopGen::PopStats.3p
@man man/man3p/Bio::PopGen::Population.3p
@man man/man3p/Bio::PopGen::PopulationI.3p
@man man/man3p/Bio::PopGen::Simulation::Coalescent.3p
@man man/man3p/Bio::PopGen::Simulation::GeneticDrift.3p
@man man/man3p/Bio::PopGen::Statistics.3p
@man man/man3p/Bio::PopGen::TagHaplotype.3p
@man man/man3p/Bio::PopGen::Utilities.3p
@man man/man3p/Bio::PrimarySeq.3p
@man man/man3p/Bio::PrimarySeqI.3p
@man man/man3p/Bio::PullParserI.3p
@man man/man3p/Bio::Range.3p
@man man/man3p/Bio::RangeI.3p
@man man/man3p/Bio::Restriction::Analysis.3p
@man man/man3p/Bio::Restriction::Enzyme.3p
@man man/man3p/Bio::Restriction::Enzyme::MultiCut.3p
@man man/man3p/Bio::Restriction::Enzyme::MultiSite.3p
@man man/man3p/Bio::Restriction::EnzymeCollection.3p
@man man/man3p/Bio::Restriction::EnzymeI.3p
@man man/man3p/Bio::Restriction::IO.3p
@man man/man3p/Bio::Restriction::IO::bairoch.3p
@man man/man3p/Bio::Restriction::IO::base.3p
@man man/man3p/Bio::Restriction::IO::itype2.3p
@man man/man3p/Bio::Restriction::IO::prototype.3p
@man man/man3p/Bio::Restriction::IO::withrefm.3p
@man man/man3p/Bio::Root::Build.3p
@man man/man3p/Bio::Root::Exception.3p
@man man/man3p/Bio::Root::HTTPget.3p
@man man/man3p/Bio::Root::IO.3p
@man man/man3p/Bio::Root::Root.3p
@man man/man3p/Bio::Root::RootI.3p
@man man/man3p/Bio::Root::Storable.3p
@man man/man3p/Bio::Root::Test.3p
@man man/man3p/Bio::Root::Utilities.3p
@man man/man3p/Bio::Root::Version.3p
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@man man/man3p/Bio::Search::BlastUtils.3p
@man man/man3p/Bio::Search::DatabaseI.3p
@man man/man3p/Bio::Search::GenericDatabase.3p
@man man/man3p/Bio::Search::GenericStatistics.3p
@man man/man3p/Bio::Search::HSP::BlastHSP.3p
@man man/man3p/Bio::Search::HSP::BlastPullHSP.3p
@man man/man3p/Bio::Search::HSP::FastaHSP.3p
@man man/man3p/Bio::Search::HSP::GenericHSP.3p
@man man/man3p/Bio::Search::HSP::HMMERHSP.3p
@man man/man3p/Bio::Search::HSP::HSPFactory.3p
@man man/man3p/Bio::Search::HSP::HSPI.3p
@man man/man3p/Bio::Search::HSP::HmmpfamHSP.3p
@man man/man3p/Bio::Search::HSP::ModelHSP.3p
@man man/man3p/Bio::Search::HSP::PSLHSP.3p
@man man/man3p/Bio::Search::HSP::PsiBlastHSP.3p
@man man/man3p/Bio::Search::HSP::PullHSPI.3p
@man man/man3p/Bio::Search::HSP::WABAHSP.3p
@man man/man3p/Bio::Search::Hit::BlastHit.3p
@man man/man3p/Bio::Search::Hit::BlastPullHit.3p
@man man/man3p/Bio::Search::Hit::Fasta.3p
@man man/man3p/Bio::Search::Hit::GenericHit.3p
@man man/man3p/Bio::Search::Hit::HMMERHit.3p
@man man/man3p/Bio::Search::Hit::HitFactory.3p
@man man/man3p/Bio::Search::Hit::HitI.3p
@man man/man3p/Bio::Search::Hit::HmmpfamHit.3p
@man man/man3p/Bio::Search::Hit::ModelHit.3p
@man man/man3p/Bio::Search::Hit::PsiBlastHit.3p
@man man/man3p/Bio::Search::Hit::PullHitI.3p
@man man/man3p/Bio::Search::Hit::hmmer3Hit.3p
@man man/man3p/Bio::Search::Iteration::GenericIteration.3p
@man man/man3p/Bio::Search::Iteration::IterationI.3p
@man man/man3p/Bio::Search::Processor.3p
@man man/man3p/Bio::Search::Result::BlastPullResult.3p
@man man/man3p/Bio::Search::Result::BlastResult.3p
@man man/man3p/Bio::Search::Result::CrossMatchResult.3p
@man man/man3p/Bio::Search::Result::GenericResult.3p
@man man/man3p/Bio::Search::Result::HMMERResult.3p
@man man/man3p/Bio::Search::Result::HmmpfamResult.3p
@man man/man3p/Bio::Search::Result::PullResultI.3p
@man man/man3p/Bio::Search::Result::ResultFactory.3p
@man man/man3p/Bio::Search::Result::ResultI.3p
@man man/man3p/Bio::Search::Result::WABAResult.3p
@man man/man3p/Bio::Search::Result::hmmer3Result.3p
@man man/man3p/Bio::Search::SearchUtils.3p
@man man/man3p/Bio::Search::StatisticsI.3p
@man man/man3p/Bio::Search::Tiling::MapTileUtils.3p
@man man/man3p/Bio::Search::Tiling::MapTiling.3p
@man man/man3p/Bio::Search::Tiling::TilingI.3p
@man man/man3p/Bio::SearchDist.3p
@man man/man3p/Bio::SearchIO.3p
@man man/man3p/Bio::SearchIO::EventHandlerI.3p
@man man/man3p/Bio::SearchIO::FastHitEventBuilder.3p
@man man/man3p/Bio::SearchIO::IteratedSearchResultEventBuilder.3p
@man man/man3p/Bio::SearchIO::SearchResultEventBuilder.3p
@man man/man3p/Bio::SearchIO::SearchWriterI.3p
@man man/man3p/Bio::SearchIO::Writer::BSMLResultWriter.3p
@man man/man3p/Bio::SearchIO::Writer::GbrowseGFF.3p
@man man/man3p/Bio::SearchIO::Writer::HSPTableWriter.3p
@man man/man3p/Bio::SearchIO::Writer::HTMLResultWriter.3p
@man man/man3p/Bio::SearchIO::Writer::HitTableWriter.3p
@man man/man3p/Bio::SearchIO::Writer::ResultTableWriter.3p
@man man/man3p/Bio::SearchIO::Writer::TextResultWriter.3p
@man man/man3p/Bio::SearchIO::XML::BlastHandler.3p
@man man/man3p/Bio::SearchIO::XML::PsiBlastHandler.3p
@man man/man3p/Bio::SearchIO::axt.3p
@man man/man3p/Bio::SearchIO::blast.3p
@man man/man3p/Bio::SearchIO::blast_pull.3p
@man man/man3p/Bio::SearchIO::blasttable.3p
@man man/man3p/Bio::SearchIO::blastxml.3p
@man man/man3p/Bio::SearchIO::cross_match.3p
@man man/man3p/Bio::SearchIO::erpin.3p
@man man/man3p/Bio::SearchIO::exonerate.3p
@man man/man3p/Bio::SearchIO::fasta.3p
@man man/man3p/Bio::SearchIO::gmap_f9.3p
@man man/man3p/Bio::SearchIO::hmmer.3p
@man man/man3p/Bio::SearchIO::hmmer2.3p
@man man/man3p/Bio::SearchIO::hmmer3.3p
@man man/man3p/Bio::SearchIO::hmmer_pull.3p
@man man/man3p/Bio::SearchIO::infernal.3p
@man man/man3p/Bio::SearchIO::megablast.3p
@man man/man3p/Bio::SearchIO::psl.3p
@man man/man3p/Bio::SearchIO::rnamotif.3p
@man man/man3p/Bio::SearchIO::sim4.3p
@man man/man3p/Bio::SearchIO::waba.3p
@man man/man3p/Bio::SearchIO::wise.3p
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@man man/man3p/Bio::Seq::LargeLocatableSeq.3p
@man man/man3p/Bio::Seq::LargePrimarySeq.3p
@man man/man3p/Bio::Seq::LargeSeq.3p
@man man/man3p/Bio::Seq::LargeSeqI.3p
@man man/man3p/Bio::Seq::Meta.3p
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@man man/man3p/Bio::Seq::MetaI.3p
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@man man/man3p/Bio::Seq::SequenceTrace.3p
@man man/man3p/Bio::Seq::SimulatedRead.3p
@man man/man3p/Bio::Seq::TraceI.3p
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@man man/man3p/Bio::SeqEvolution::DNAPoint.3p
@man man/man3p/Bio::SeqEvolution::EvolutionI.3p
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@man man/man3p/Bio::SeqFeature::Computation.3p
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@man man/man3p/Bio::SeqFeature::Gene::Exon.3p
@man man/man3p/Bio::SeqFeature::Gene::ExonI.3p
@man man/man3p/Bio::SeqFeature::Gene::GeneStructure.3p
@man man/man3p/Bio::SeqFeature::Gene::GeneStructureI.3p
@man man/man3p/Bio::SeqFeature::Gene::Intron.3p
@man man/man3p/Bio::SeqFeature::Gene::NC_Feature.3p
@man man/man3p/Bio::SeqFeature::Gene::Poly_A_site.3p
@man man/man3p/Bio::SeqFeature::Gene::Promoter.3p
@man man/man3p/Bio::SeqFeature::Gene::Transcript.3p
@man man/man3p/Bio::SeqFeature::Gene::TranscriptI.3p
@man man/man3p/Bio::SeqFeature::Gene::UTR.3p
@man man/man3p/Bio::SeqFeature::Generic.3p
@man man/man3p/Bio::SeqFeature::Lite.3p
@man man/man3p/Bio::SeqFeature::PositionProxy.3p
@man man/man3p/Bio::SeqFeature::Primer.3p
@man man/man3p/Bio::SeqFeature::SiRNA::Oligo.3p
@man man/man3p/Bio::SeqFeature::SiRNA::Pair.3p
@man man/man3p/Bio::SeqFeature::Similarity.3p
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@man man/man3p/Bio::SeqFeature::Tools::Unflattener.3p
@man man/man3p/Bio::SeqFeature::TypedSeqFeatureI.3p
@man man/man3p/Bio::SeqFeatureI.3p
@man man/man3p/Bio::SeqI.3p
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@man man/man3p/Bio::Tools::AlignFactory.3p
@man man/man3p/Bio::Tools::Alignment::Consed.3p
@man man/man3p/Bio::Tools::Alignment::Trim.3p
@man man/man3p/Bio::Tools::AmpliconSearch.3p
@man man/man3p/Bio::Tools::Analysis::DNA::ESEfinder.3p
@man man/man3p/Bio::Tools::Analysis::Protein::Domcut.3p
@man man/man3p/Bio::Tools::Analysis::Protein::ELM.3p
@man man/man3p/Bio::Tools::Analysis::Protein::GOR4.3p
@man man/man3p/Bio::Tools::Analysis::Protein::HNN.3p
@man man/man3p/Bio::Tools::Analysis::Protein::Mitoprot.3p
@man man/man3p/Bio::Tools::Analysis::Protein::NetPhos.3p
@man man/man3p/Bio::Tools::Analysis::Protein::Scansite.3p
@man man/man3p/Bio::Tools::Analysis::Protein::Sopma.3p
@man man/man3p/Bio::Tools::Analysis::SimpleAnalysisBase.3p
@man man/man3p/Bio::Tools::AnalysisResult.3p
@man man/man3p/Bio::Tools::Blat.3p
@man man/man3p/Bio::Tools::CodonTable.3p
@man man/man3p/Bio::Tools::Coil.3p
@man man/man3p/Bio::Tools::ECnumber.3p
@man man/man3p/Bio::Tools::EMBOSS::Palindrome.3p
@man man/man3p/Bio::Tools::EPCR.3p
@man man/man3p/Bio::Tools::ERPIN.3p
@man man/man3p/Bio::Tools::ESTScan.3p
@man man/man3p/Bio::Tools::Eponine.3p
@man man/man3p/Bio::Tools::Est2Genome.3p
@man man/man3p/Bio::Tools::Fgenesh.3p
@man man/man3p/Bio::Tools::FootPrinter.3p
@man man/man3p/Bio::Tools::GFF.3p
@man man/man3p/Bio::Tools::Gel.3p
@man man/man3p/Bio::Tools::Geneid.3p
@man man/man3p/Bio::Tools::Genemark.3p
@man man/man3p/Bio::Tools::Genewise.3p
@man man/man3p/Bio::Tools::Genomewise.3p
@man man/man3p/Bio::Tools::Genscan.3p
@man man/man3p/Bio::Tools::Glimmer.3p
@man man/man3p/Bio::Tools::Grail.3p
@man man/man3p/Bio::Tools::GuessSeqFormat.3p
@man man/man3p/Bio::Tools::HMMER::Domain.3p
@man man/man3p/Bio::Tools::HMMER::Results.3p
@man man/man3p/Bio::Tools::HMMER::Set.3p
@man man/man3p/Bio::Tools::Hmmpfam.3p
@man man/man3p/Bio::Tools::IUPAC.3p
@man man/man3p/Bio::Tools::Infernal.3p
@man man/man3p/Bio::Tools::Lucy.3p
@man man/man3p/Bio::Tools::MZEF.3p
@man man/man3p/Bio::Tools::Match.3p
@man man/man3p/Bio::Tools::OddCodes.3p
@man man/man3p/Bio::Tools::Phylo::Gerp.3p
@man man/man3p/Bio::Tools::Phylo::Gumby.3p
@man man/man3p/Bio::Tools::Phylo::Molphy.3p
@man man/man3p/Bio::Tools::Phylo::Molphy::Result.3p
@man man/man3p/Bio::Tools::Phylo::PAML.3p
@man man/man3p/Bio::Tools::Phylo::PAML::Codeml.3p
@man man/man3p/Bio::Tools::Phylo::PAML::ModelResult.3p
@man man/man3p/Bio::Tools::Phylo::PAML::Result.3p
@man man/man3p/Bio::Tools::Phylo::Phylip::ProtDist.3p
@man man/man3p/Bio::Tools::Prediction::Exon.3p
@man man/man3p/Bio::Tools::Prediction::Gene.3p
@man man/man3p/Bio::Tools::Primer3.3p
@man man/man3p/Bio::Tools::Primer::Assessor::Base.3p
@man man/man3p/Bio::Tools::Primer::AssessorI.3p
@man man/man3p/Bio::Tools::Primer::Feature.3p
@man man/man3p/Bio::Tools::Primer::Pair.3p
@man man/man3p/Bio::Tools::Prints.3p
@man man/man3p/Bio::Tools::Profile.3p
@man man/man3p/Bio::Tools::Promoterwise.3p
@man man/man3p/Bio::Tools::PrositeScan.3p
@man man/man3p/Bio::Tools::Protparam.3p
@man man/man3p/Bio::Tools::Pseudowise.3p
@man man/man3p/Bio::Tools::QRNA.3p
@man man/man3p/Bio::Tools::RNAMotif.3p
@man man/man3p/Bio::Tools::RandomDistFunctions.3p
@man man/man3p/Bio::Tools::RepeatMasker.3p
@man man/man3p/Bio::Tools::Run::GenericParameters.3p
@man man/man3p/Bio::Tools::Run::ParametersI.3p
@man man/man3p/Bio::Tools::Run::RemoteBlast.3p
@man man/man3p/Bio::Tools::Run::StandAloneBlast.3p
@man man/man3p/Bio::Tools::Run::StandAloneNCBIBlast.3p
@man man/man3p/Bio::Tools::Run::StandAloneWUBlast.3p
@man man/man3p/Bio::Tools::Run::WrapperBase.3p
@man man/man3p/Bio::Tools::Run::WrapperBase::CommandExts.3p
@man man/man3p/Bio::Tools::Seg.3p
@man man/man3p/Bio::Tools::SeqPattern.3p
@man man/man3p/Bio::Tools::SeqPattern::Backtranslate.3p
@man man/man3p/Bio::Tools::SeqStats.3p
@man man/man3p/Bio::Tools::SeqWords.3p
@man man/man3p/Bio::Tools::SiRNA.3p
@man man/man3p/Bio::Tools::SiRNA::Ruleset::saigo.3p
@man man/man3p/Bio::Tools::SiRNA::Ruleset::tuschl.3p
@man man/man3p/Bio::Tools::Sigcleave.3p
@man man/man3p/Bio::Tools::Signalp.3p
@man man/man3p/Bio::Tools::Signalp::ExtendedSignalp.3p
@man man/man3p/Bio::Tools::Sim4::Exon.3p
@man man/man3p/Bio::Tools::Sim4::Results.3p
@man man/man3p/Bio::Tools::Spidey::Exon.3p
@man man/man3p/Bio::Tools::Spidey::Results.3p
@man man/man3p/Bio::Tools::TandemRepeatsFinder.3p
@man man/man3p/Bio::Tools::TargetP.3p
@man man/man3p/Bio::Tools::Tmhmm.3p
@man man/man3p/Bio::Tools::dpAlign.3p
@man man/man3p/Bio::Tools::ipcress.3p
@man man/man3p/Bio::Tools::isPcr.3p
@man man/man3p/Bio::Tools::pICalculator.3p
@man man/man3p/Bio::Tools::pSW.3p
@man man/man3p/Bio::Tools::tRNAscanSE.3p
@man man/man3p/Bio::Tree::AlleleNode.3p
@man man/man3p/Bio::Tree::AnnotatableNode.3p
@man man/man3p/Bio::Tree::Compatible.3p
@man man/man3p/Bio::Tree::DistanceFactory.3p
@man man/man3p/Bio::Tree::Draw::Cladogram.3p
@man man/man3p/Bio::Tree::Node.3p
@man man/man3p/Bio::Tree::NodeI.3p
@man man/man3p/Bio::Tree::NodeNHX.3p
@man man/man3p/Bio::Tree::RandomFactory.3p
@man man/man3p/Bio::Tree::Statistics.3p
@man man/man3p/Bio::Tree::Tree.3p
@man man/man3p/Bio::Tree::TreeFunctionsI.3p
@man man/man3p/Bio::Tree::TreeI.3p
@man man/man3p/Bio::TreeIO.3p
@man man/man3p/Bio::TreeIO::NewickParser.3p
@man man/man3p/Bio::TreeIO::TreeEventBuilder.3p
@man man/man3p/Bio::TreeIO::cluster.3p
@man man/man3p/Bio::TreeIO::lintree.3p
@man man/man3p/Bio::TreeIO::newick.3p
@man man/man3p/Bio::TreeIO::nexml.3p
@man man/man3p/Bio::TreeIO::nexus.3p
@man man/man3p/Bio::TreeIO::nhx.3p
@man man/man3p/Bio::TreeIO::pag.3p
@man man/man3p/Bio::TreeIO::phyloxml.3p
@man man/man3p/Bio::TreeIO::svggraph.3p
@man man/man3p/Bio::TreeIO::tabtree.3p
@man man/man3p/Bio::UpdateableSeqI.3p
@man man/man3p/Bio::Variation::AAChange.3p
@man man/man3p/Bio::Variation::AAReverseMutate.3p
@man man/man3p/Bio::Variation::Allele.3p
@man man/man3p/Bio::Variation::DNAMutation.3p
@man man/man3p/Bio::Variation::IO.3p
@man man/man3p/Bio::Variation::IO::flat.3p
@man man/man3p/Bio::Variation::IO::xml.3p
@man man/man3p/Bio::Variation::RNAChange.3p
@man man/man3p/Bio::Variation::SNP.3p
@man man/man3p/Bio::Variation::SeqDiff.3p
@man man/man3p/Bio::Variation::VariantI.3p
@man man/man3p/Bio::WebAgent.3p
share/examples/bioperl/
share/examples/bioperl/Bio-DB-GFF/
share/examples/bioperl/Bio-DB-GFF/load_ucsc.pl
share/examples/bioperl/align/
share/examples/bioperl/align/FastAlign.pl
share/examples/bioperl/align/align_on_codons.pl
share/examples/bioperl/align/aligntutorial.pl
share/examples/bioperl/align/clustalw.pl
share/examples/bioperl/align/simplealign.pl
share/examples/bioperl/bioperl.pl
share/examples/bioperl/cluster/
share/examples/bioperl/cluster/dbsnp.pl
share/examples/bioperl/contributed/
share/examples/bioperl/contributed/nmrpdb_parse.pl
share/examples/bioperl/contributed/prosite2perl.pl
share/examples/bioperl/contributed/rebase2list.pl
share/examples/bioperl/db/
share/examples/bioperl/db/dbfetch
share/examples/bioperl/db/est_tissue_query.pl
share/examples/bioperl/db/gb2features.pl
share/examples/bioperl/db/getGenBank.pl
share/examples/bioperl/db/get_seqs.pl
share/examples/bioperl/db/rfetch.pl
share/examples/bioperl/db/use_registry.pl
share/examples/bioperl/generate_random_seq.pl
share/examples/bioperl/liveseq/
share/examples/bioperl/liveseq/change_gene.pl
share/examples/bioperl/longorf.pl
share/examples/bioperl/make_primers.pl
share/examples/bioperl/popgen/
share/examples/bioperl/popgen/parse_calc_stats.pl
share/examples/bioperl/quality/
share/examples/bioperl/quality/svgtrace.pl
share/examples/bioperl/rev_and_trans.pl
share/examples/bioperl/revcom_dir.pl
share/examples/bioperl/root/
share/examples/bioperl/root/README
share/examples/bioperl/root/exceptions1.pl
share/examples/bioperl/root/exceptions2.pl
share/examples/bioperl/root/exceptions3.pl
share/examples/bioperl/root/exceptions4.pl
share/examples/bioperl/root/lib/
share/examples/bioperl/root/lib/TestInterface.pm
share/examples/bioperl/root/lib/TestObject.pm
share/examples/bioperl/searchio/
share/examples/bioperl/searchio/blast_example.pl
share/examples/bioperl/searchio/custom_writer.pl
share/examples/bioperl/searchio/hitwriter.pl
share/examples/bioperl/searchio/hspwriter.pl
share/examples/bioperl/searchio/htmlwriter.pl
share/examples/bioperl/searchio/psiblast_features.pl
share/examples/bioperl/searchio/psiblast_iterations.pl
share/examples/bioperl/searchio/rawwriter.pl
share/examples/bioperl/searchio/resultwriter.pl
share/examples/bioperl/searchio/waba2gff.pl
share/examples/bioperl/searchio/waba2gff3.pl
share/examples/bioperl/sirna/
share/examples/bioperl/sirna/TAG
share/examples/bioperl/sirna/rnai_finder.cgi
share/examples/bioperl/structure/
share/examples/bioperl/structure/structure-io.pl
share/examples/bioperl/subsequence.cgi
share/examples/bioperl/tk/
share/examples/bioperl/tk/gsequence.pl
share/examples/bioperl/tk/hitdisplay.pl
share/examples/bioperl/tools/
share/examples/bioperl/tools/extract_genes.pl
share/examples/bioperl/tools/gb_to_gff.pl
share/examples/bioperl/tools/gff2ps.pl
share/examples/bioperl/tools/parse_codeml.pl
share/examples/bioperl/tools/psw.pl
share/examples/bioperl/tools/reverse-translate.pl
share/examples/bioperl/tools/run_genscan.pl
share/examples/bioperl/tools/run_primer3.pl
share/examples/bioperl/tools/seq_pattern.pl
share/examples/bioperl/tools/standaloneblast.pl
share/examples/bioperl/tree/
share/examples/bioperl/tree/paup2phylip.pl
